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Topic: Dna

Results

DNA Sequence Compression Using Adaptive Particle Swarm Optimization-Based Memetic Algorithm

2011 / IEEE
By: Yu-Hui Shi; Zhen Ji; Jiarui Zhou; Zexuan Zhu;

The iPlant Collaborative: Cyberinfrastructure to Feed the World

2011 / IEEE
By: Stanzione, D.;

Label-Free Detection of DNA by Field-Effect Devices

2011 / IEEE
By: Kataoka-Hamai, C.; Miyahara, Y.;

Learning Speaker-Specific Characteristics With a Deep Neural Architecture

2011 / IEEE
By: Ke Chen; Salman, A.;

Fabrication of Biologically Functionalized, Electrically Conducting, and Aligned Magnetic Nanoparticles

2011 / IEEE
By: Sarkar, D.; Mandal, K.; Das, R.; Mandal, M.;

Concentration of Magnetic Beads Utilizing Light-Induced Electro-Osmosis Flow

2011 / IEEE
By: Ming-Huei Liu; Tung-Ming Yu; Harishchandra, P.T.; Shih-Mo Yang; Cheng-Hsien Liu; Long Hsu;

Electrostatic Accumulation and Release of DNA Using a Micromachined Lance

2011 / IEEE
By: Howell, L.L.; Burnett, S.H.; Jensen, B.D.; Aten, Q.T.;

Stochastic Modeling of the Relationship between Copy Number and Gene Expression Based on Transcriptional Logic

2012 / IEEE
By: Yidong Chen; Serpedin, E.; Dougherty, E.R.; Fang-Han Hsu;

Filter-Based Methodology for the Location of Hot Spots in Proteins and Exons in DNA

2012 / IEEE
By: Antoniou, A.; Wu-Sheng Lu; Ramachandran, P.;

Photobleaching of Cy5 Conjugated Lipid Bilayers Determined With Optical Microresonators

2012 / IEEE
By: Armani, A.M.; Freeman, L.M.;

Optical Fiber Ring Cavity Sensor for Label-Free DNA Detection

2012 / IEEE
By: Childs, P.; Marchelli, R.; Corradini, R.; Veneziano, R.; Pissadakis, S.; Selleri, S.; Cucinotta, A.; Sozzi, M.; Candiani, A.;

A DNA-Based Algorithm for Minimizing Decision Rules: A Rough Sets Approach

2011 / IEEE
By: Watada, J.; Yu-Yi Chu; Ikno Kim; Pedrycz, W.; Jui-Yu Wu;

Nanoparticle-Based Biobarcoded DNA Sensor for the Rapid Detection of pagA Gene of Bacillus Anthracis

2011 / IEEE
By: Anderson, M.J.; Deng Zhang; Alocilja, E.C.; Huarng, M.C.;

Tool that integrates distance based programs for reconstructing phylogenetic trees

2011 / IEEE
By: Goncalves, G.; Dias, G.; Torres, M.; Vieira, C.;

Evaluating Dynamic Effects of Copy Number Alterations on Gene Expression Using a Single Transcription Model

2012 / IEEE
By: Yidong Chen; Serpedin, E.; Fang-Han Hsu; Dougherty, E.R.;

Memetic Algorithms for De Novo Motif Discovery

2012 / IEEE
By: Kin-Hong Lee; Kwong-Sak Leung; Tak-Ming Chan;

Redesigning Viral Genomes

2012 / IEEE
By: Skiena, S.S.;

Algorithms and Genome Sequencing: Identifying Driver Pathways in Cancer

2012 / IEEE
By: Vandin, F.; Raphael, B.; Upfal, E.;

Label-Free CMOS Bio Sensor With On-Chip Noise Reduction Scheme for Real-Time Quantitative Monitoring of Biomolecules

2012 / IEEE
By: Euisik Yoon; Seong-Jin Kim;

Anonymization of Longitudinal Electronic Medical Records

2012 / IEEE
By: Saygin, Y.; Nergiz, M.E.; Loukides, G.; Tamersoy, A.; Malin, B.;

CMOS Low Current Measurement System for Biomedical Applications

2012 / IEEE
By: Vanderlick, T.K.; Jian Xu; Dongsoo Kim; Goldstein, B.; Culurciello, E.;

16-Channel CMOS Impedance Spectroscopy DNA Analyzer With Dual-Slope Multiplying ADCs

2012 / IEEE
By: Soleymani, L.; Jafari, H.; Genov, R.;

Effect of Low-Temperature Plasma on Deactivation of Hepatitis B Virus

2012 / IEEE
By: Zeng-Hui Zhang; Zhao-Yu Peng; Xi-Li Wu; Guan-Jun Zhang; Xing-Min Shi; Zheng-Shi Chang; Xian-Jun Shao;

Cross-Contamination Avoidance for Droplet Routing in Digital Microfluidic Biochips

2012 / IEEE
By: Chakrabarty, K.; Yang Zhao;

Molecular-Level Dengue Fever Diagnostics: Developing a Combination of RT-LAMP and Paper-Based Devices

2012 / IEEE
By: Chao-Min Cheng; Jiann-Hwa Chen; Da-Jeng Yao; Shih-Chun Yang; Shih-Jie Lo;

Programmable Construction of Nanostructures: Assembly of Nanostructures with Various Nanocomponents.

2012 / IEEE
By: Deaton, R.; Jeong-Hwan Kim; Jin-Woo Kim;

Science in the Cloud: Accelerating Discovery in the 21st Century

2012 / IEEE
By: Konerding, D.E.; Kohlhoff, K.J.; Hellerstein, J.L.;

Learning Character Strings via Mastermind Queries, With a Case Study Involving mtDNA

2012 / IEEE
By: Goodrich, M.T.;

Nanostructured Metal-Enhanced Raman Spectroscopy for DNA Base Detection

2012 / IEEE
By: Cailing Hou; Li Zhan; Zhiqian Zhu; Zhimin Wang;

Guest Editors' Introduction: Synthetic Biology

2012 / IEEE
By: Hassoun, S.; Densmore, D.;

Design Automation for Synthetic Biological Systems

2012 / IEEE
By: Hassoun, S.; Densmore, D.;

Digital Signal Processing With Molecular Reactions

2012 / IEEE
By: Hua Jiang; Parhi, K.K.; Riedel, M.D.;

pGraph: Efficient Parallel Construction of Large-Scale Protein Sequence Homology Graphs

2012 / IEEE
By: Cannon, W.R.; Kalyanaraman, A.; Changjun Wu;

A GPU-Based Approach to Accelerate Computational Protein-DNA Docking

2012 / IEEE
By: Chunlei Chen; Jiadong Wu; Bo Hong;

Reconstruction of Large-Scale Gene Regulatory Networks Using Bayesian Model Averaging

2012 / IEEE
By: Haseong Kim; Gelenbe, E.;

Glass-Based Continuous-Flow PCR Chip With a Portable Control System for DNA Amplification

2012 / IEEE
By: Weiping Yan; Ning Xue;

Fast Parallel DNA-Based Algorithms for Molecular Computation: Quadratic Congruence and Factoring Integers

2012 / IEEE
By: Weng-Long Chang;

Analysis of Cell Binding and Internalization of Multivalent PEG-Based Gene Delivery Vehicles

2012 / IEEE
By: Moore, N.M.; Sakiyama-Elbert, S.E.;

Pattern Clustering With Statistical Methods Using a DNA-Based Algorithm

2012 / IEEE
By: Pedrycz, W.; Watada, J.; Ikno Kim; Jui-Yu Wu;

Joint Parameter Estimation and Base-Calling for Pyrosequencing Systems

2012 / IEEE
By: Ting Wu; Vikalo, H.;

Signal Processing in Genomics and Proteomics: Defining Its Role [From the Guest Editors]

2012 / IEEE
By: Klein-Seetharaman, J.; Dimitrova, N.; Tewfik, A.H.; Beyerlein, P.;

Sequence-Based Prediction of DNA-Binding Residues in Proteins with Conservation and Correlation Information

2012 / IEEE
By: Jing Guo; Xin Ma; Xiao Sun; Jian-Ming Xie; Hong-De Liu;

Multiscale Denoising of Biological Data: A Comparative Analysis

2012 / IEEE
By: Meskin, N.; Nounou, H.N.; Nounou, M.N.; Dougherty, E.R.; Datta, A.;

In Silico Search of DNA Drugs Targeting Oncogenes

2012 / IEEE
By: Gizeli, E.; Papadakis, G.;

An Evolutionary Algorithm Approach for Feature Generation from Sequence Data and Its Application to DNA Splice Site Prediction

2012 / IEEE
By: Compton, J.; Kamath, U.; Shehu, A.; De Jong, K.A.; Islamaj-Dogan, R.;

Genomic Signal Processing [Life Sciences]

2012 / IEEE
By: Dougherty, E.R.;

Distinguishing Endogenous Retroviral LTRs from SINE Elements Using Features Extracted from Evolved Side Effect Machines

2012 / IEEE
By: Ashlock, W.; Datta, S.;

Detecting Changes in DNA Copy Number: Reviewing signal processing techniques

2012 / IEEE
By: Pique-Regi, R.; Ortega, A.; Tewfik, A.; Asgharzadeh, S.;

Computational Prediction of Important Regions in Protein Sequences [Life Sciences]

2012 / IEEE
By: Pietrosemoli, N.; Pazos, F.; Segura-Cabrera, A.; Lopez, D.;

Developing Algorithms to Discover Novel Cancer Genes: A look at the challenges and approaches

2012 / IEEE
By: Getz, G.; Mermel, C.; Saksena, G.;

Graphical Models and Inference on Graphs in Genomics: Challenges of high-throughput data analysis

2012 / IEEE
By: Shamaiah, M.; Vikalo, H.; Sang Hyun Lee;

How Little Do We Actually Know? On the Size of Gene Regulatory Networks

2012 / IEEE
By: Taubert, J.; Ruckert, U.; Rottger, R.; Baumbach, J.;

Comparative Analysis of Biological Networks: Hidden Markov model and Markov chain-based approach

2012 / IEEE
By: Sahraeian, S.M.E.; Xiaoning Qian; Byung-Jun Yoon;

Understanding MicroRNA Regulation: A computational perspective

2012 / IEEE
By: Jia Meng; Dong Yue; Yufei Huang; Maozu Guo; Chen, C.L.P.; Mingzhu Lu;

Minimax-Optimal Hypothesis Testing With Estimation-Dependent Costs

2012 / IEEE
By: Jajamovich, G.H.; Tajer, A.; Xiaodong Wang;

Genetic Algorithms Applied in Face Recognition

2012 / IEEE
By: C Paschoarelli Veiga, Antonio; Lucia Flores, Edna; Arantes Carrijo, Gilberto; Xavier Medeiros, Luciano;

Effective proliferation control of human cancer cells using electrical pulses

2012 / IEEE
By: Camarillo, I.G.; Otto, K.; Reece, L.M.; Leary, J.F.; Campana, L.G.; Salameh, T.; Funian Xiao; Sundararajan, R.;

Designing Filters for Fast-Known NcRNA Identification

2012 / IEEE
By: Cheng Yuan; Buhler, J.; Yanni Sun;

Modeling and simulation of a manycore PCR-CE lab-on-chip for DNA sequencing using SystemC/SystemC-AMS

2010 / IEEE / 978-1-4244-8997-8
By: Pecheux, F.; Habib, A.;

DNA hybridization for nanocube functionalization

2010 / IEEE / 978-1-4244-5261-3
By: Amal, R.; Goon, I.Y.; Rouesnel, W.; Gupta, B.; Gooding, J.J.;

Ensembles of classifiers and their aplication to bioinformatics problems

2010 / IEEE / 978-1-4244-9168-1
By: Palade, V.;

Target DNA recognition using electrochemical impedance spectroscopy

2010 / IEEE / 978-1-4244-5261-3
By: Michaels, P.; Ciampi, S.; Chan Yean Yean; Gooding, J.J.;

Generating images from non-raster data in AFM

2011 / IEEE / 978-1-4577-0081-1
By: Andersson, S.B.; Peng Huang;

Joint DAC/IWBDA special session design and synthesis of biological circuits

2011 / IEEE / 978-1-4503-0636-2
By: Densmore, D.; Voigt, C.; Winfree, E.; Arkin, A.; Xiling Shen; Krishnaswamy, S.; Horowitz, M.;

Simultaneous Identification for Synergistic Transcription Factors and their Transcription Factor Binding Sites

2011 / IEEE / 978-1-61284-709-2
By: Huang, G.T.-W.; Zing Tsung-Yeh Tsai; Huai-Kuang Tsai;

A retrospective study of paediatric health and development following pre-implantation genetic diagnosis and screening

2011 / IEEE / 978-1-4577-1190-9
By: Olive, M.; Solomonides, T.; Lashwood, A.;

A fully-integrated cantilever-based DNA detection SoC in a CMOS Bio-MEMS process

2011 / IEEE / 978-1-61284-175-5
By: Hsiao-Ting Hsueh; Bing-Jye Kuo; Po-Yun Hsiao; Bi-Ru Wu; Li-Guang Chen; Chih-Ting Lin; Tsung-Hsien Lin; Che-Wei Huang; Yu-Jie Huang; Shey-Shi Lu; Chorng-Kuang Wang; Ying-Zong Juang; Hsin-Hao Liao; Hann-Huei Tsai;

FPGA bitstream protection with PUFs, obfuscation, and multi-boot

2011 / IEEE / 978-1-4577-0642-4
By: Ugurdag, H.F.; Yildiz, A.; Ozkurt, O.; Goren, S.;

Advantages and GPU implementation of high-performance indexed DNA search based on suffix arrays

2011 / IEEE / 978-1-61284-383-4
By: Roma, N.; Sebastiao, N.; Encarnaijao, G.;

Synchronous sequential computation with molecular reactions

2011 / IEEE / 978-1-4503-0636-2
By: Parhi, K.; Riedel, M.; Hua Jiang;

DNA Algorithm Employing Temperature Gradient for Chinese Postman Problem

2011 / IEEE / 978-1-61284-764-1
By: Zoraida, B.S.E.;

HPCS 2011 keynotes: Tuesday keynote I: High-performance computing and biology: The quest for a predictive biological theory

2011 / IEEE / 978-1-61284-383-4
By: Stevens, R.L.;

High performance implementation of planted motif problem using suffix trees

2011 / IEEE / 978-1-61284-383-4
By: Dasari, N.S.; Zubair, M.; Ranjan, D.;

A KTAP framework of DNA damage repair mechanism under Ion Radiation (IR) perturbation

2011 / IEEE / 978-988-17255-9-2
By: Qi Jinpeng; Han Fang; Ding Yongsheng;

Tuning an activator-repressor clock employing retroactivity

2011 / IEEE / 978-1-4577-0081-1
By: Del Vecchio, D.; Jayanthi, S.; Rosenberg, A.;

Electrochemistry of toluidine blue O in situ bound to a DNA-modified electrode

2011 / IEEE / 978-1-4577-0378-2
By: Deng-Kai Yang; Lin-Chi Chen;

Global characterization of physical plasma impact on vegetative microorganisms

2011 / IEEE / 978-1-61284-329-2
By: Winter, J.; Reuter, S.; Winter, T.; Kusch, K.; Weltmann, K.; Hecker, M.; Kusch, H.; Polak, M.; Ehlbeck, J.; Siemann, R.;

Identification of tandem repeats based on Fourier Transform

2011 / IEEE / 978-1-4244-9698-3
By: Shang Dongjuan;

Dot plot analysis of alpha satellite DNA

2011 / IEEE / 978-1-61284-943-0
By: Voina, A.; Pop, P.G.;

AAA in a Cloud-Based Virtual DIME Network Architecture (DNA)

2011 / IEEE / 978-1-4577-0134-4
By: Mikkilineni, R.; Celesti, A.; Tusa, F.;

Single-molecule electronic detection using nanoscale field-effect devices

2011 / IEEE / 978-1-4503-0636-2
By: Sorgenfrei, S.; Shepard, K.;

Influence of non-thermal atmospheric pressure plasma on DNA of human keratinocytes (HaCaT): Role of reactive oxygen species

2011 / IEEE / 978-1-61284-329-2
By: Wende, K.; Lindequist, U.; Haertel, B.; Blackert, S.; von Woedtke, T.; Oehmigen, K.;

A DNA genetic algorithm with reconstruct operator for chemical process modeling

2011 / IEEE / 978-1-4244-9439-2
By: Zhang Ridong; Chen Xiao;

Applying DNA computation to clustering in graph

2011 / IEEE / 978-1-4577-0536-6
By: Xiyu Liu; Jie Xue;

Viral Systems Application for Knapsack Problem

2011 / IEEE / 978-1-4577-0975-3
By: Kartika, E.K.; Suryadi, D.;

An Efficient and Scalable Implementation of SNP-Pair Interaction Testing for Genetic Association Studies

2011 / IEEE / 978-1-61284-425-1
By: Koesterke, L.; Schnable, P.S.; Nettleton, D.; Cheng-Ting Yeh; Vaughn, M.; Jinliang Yang; Kusnierczyk, W.; Welch, S.M.; Stanzione, D.;

The method of generative design in new Chinese furniture

2011 / IEEE / 978-1-61284-486-2
By: Zou Weihua;

IRTG: A Grid Middleware for Bioinformatics

2011 / IEEE / 978-1-4577-0863-3
By: Elmasri, R.; Taha, K.;

Unsupervised remote sensing image classification using an artificial DNA computing

2011 / IEEE / 978-1-4244-9953-3
By: Pingxiang Li; Liangpei Zhang; Yanfei Zhong; Hongzan Jiao;

A new modeling strategy for eukaryotic promoter recognition and prediction

2011 / IEEE / 978-1-61284-181-6
By: Chuangcun Wang; Yibin Song; Qicheng Liu; Wenyan Zhang; Shuanhu Wu;

Enabling Data Hiding for Resource Sharing in Cloud Computing Environments Based on DNA Sequences

2011 / IEEE / 978-1-4577-0879-4
By: Shanmugam, B.; Abbasy, M.R.;

Mining transcriptional association rules from breast cancer profile data

2011 / IEEE / 978-1-4577-0966-1
By: Meiliu Lu; Malpani, R.; Wing Kin Sung; Du Zhang;

Primary Designation and Characterization of a Molecular Beacon DNA Sensing Probe

2011 / IEEE / 978-1-4577-0860-2
By: Bo Sun; Shuqing Sun; Zhao Dai; Jimei Zhang; Yanshan Liu; Heng Miao; Guo Zheng; Shichao Xu; Zongchen Ren; Chenping Lv; Lidan Sun; Juan Chen; Hainan Wang; Yueqian Yang;

Preliminary Study of CdTe Quantum Dots Applied in DNA Sensors

2011 / IEEE / 978-1-4577-0860-2
By: Chenping Lv; Shichao Xu; Lidan Sun; Juan Chen; Hainan Wang; Jimei Zhang; Yueqian Yang; Heng Miao; Jiangli Lou;

The Art of Asking Questions in Genetics Teaching

2011 / IEEE / 978-1-4577-0860-2
By: Jiwei Wu;

Integration of micro-PCR with CMOS EC detection: Opportunity and challenges

2011 / IEEE / 978-1-61284-777-1
By: Rong Zhang; Zewen Liu; Taihong Wang; Weihua Si; Hao Tian; Jian Qin; Cangran Guo;

Study on DNA electrochemical behavior for label-free micro PCR application

2011 / IEEE / 978-1-61284-777-1
By: Rong Zhang; Zewen Liu; Taihong Wang; Weihua Si; Hao Tian; Jian Qin;

Computing the Phylogenetic Likelihood Function Out-of-Core

2011 / IEEE / 978-1-61284-425-1
By: Stamatakis, A.; Izquierdo-Carrasco, F.;

Increasing throughput and sensitivity of DNA Methylation analysis through functional nanoparticles

2011 / IEEE / 978-1-61284-777-1
By: Keeley, B.; Bailey, V.; Yi Zhang; Stark, A.; Tza-Huei Wang;

Quantum dots-enabled high resolution analysis of gene copy number variation

2011 / IEEE / 978-1-61284-777-1
By: Tza-Huei Wang; Yi Zhang;

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