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Topic: Genetics

Results

Digital Machinery and Analog Brains

2011 / IEEE
By: Holmes, N.;

Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes

2011 / IEEE
By: Saltz, J.H.; Moreno, C.S.; Kurc, T.M.; Van Meir, E.G.; Pan, T.; Sharma, A.; Brat, D.J.; Jingjing Gao; Gutman, D.A.; Fusheng Wang; Cooper, L.A.D.; Jun Kong; Chisolm, C.;

Multi-platform Data Integration in Microarray Analysis

2011 / IEEE
By: Potamias, G.; Stathopoulos, E.; Ioannou, M.; Sanidas, E.; Tsiknakis, M.; Zervakis, M.; Tsiliki, G.; Kafetzopoulos, D.;

A Modified Binary Particle Swarm Optimization for Selecting the Small Subset of Informative Genes From Gene Expression Data

2011 / IEEE
By: Omatu, S.; Deris, S.; Yoshioka, M.; Mohamad, M.S.;

Delay-Independent Stability of Genetic Regulatory Networks

2011 / IEEE
By: Fang-Xiang Wu;

A Multi-Facet Survey on Memetic Computation

2011 / IEEE
By: Meng-Hiot Lim; Yew-Soon Ong; Xianshun Chen; Kay Chen Tan;

Maintaining Healthy Population Diversity Using Adaptive Crossover, Mutation, and Selection

2011 / IEEE
By: O'Riordan, C.; Maher, J.; McGinley, B.; Morgan, F.;

Comparative Analysis of Genomic Signal Processing for Microarray Data Clustering

2011 / IEEE
By: Sungoor, A.; Istepanian, R.S.H.; Nebel, J.-C.;

Stability and Bifurcation Analysis of Models for Zebrafish Somitogenesis

2011 / IEEE
By: Li-Ping Tian; Fang-Xiang Wu;

Negative Feedback Through mRNA Provides the Best Control of Gene-Expression Noise

2011 / IEEE
By: Singh, A.;

Electrostatic Accumulation and Release of DNA Using a Micromachined Lance

2011 / IEEE
By: Howell, L.L.; Burnett, S.H.; Jensen, B.D.; Aten, Q.T.;

Stochastic Modeling of the Relationship between Copy Number and Gene Expression Based on Transcriptional Logic

2012 / IEEE
By: Yidong Chen; Serpedin, E.; Dougherty, E.R.; Fang-Han Hsu;

Generating Stochastic Gene Regulatory Networks Consistent With Pathway Information and Steady-State Behavior

2012 / IEEE
By: Knight, J.M.; Dougherty, E.R.; Datta, A.;

A Systems Biology Approach to Solving the Puzzle of Unknown Genomic Gene-Function Association Using Grid-Ready SVM Committee Machines

2012 / IEEE
By: Lee, T.-L.M.; Jung-Hsien Chiang;

Compressed Adjacency Matrices: Untangling Gene Regulatory Networks

2012 / IEEE
By: Dinkla, K.; van Wijk, J.J.; Westenberg, M.A.;

On the Steady States of Uncertain Genetic Regulatory Networks

2012 / IEEE
By: Chesi, G.;

A New Method for Preliminary Identification of Gene Regulatory Networks from Gene Microarray Cancer Data Using Ridge Partial Least Squares With Recursive Feature Elimination and Novel Brier and Occurrence Probability Measures

2012 / IEEE
By: Wu, H.C.; Chan, S.C.; Tsui, K.M.;

A Weighted Power Framework for Integrating Multisource Information: Gene Function Prediction in Yeast

2012 / IEEE
By: Pal, S.K.; Bandyopadhyay, S.; Ray, S.S.;

Developing New Fitness Functions in Genetic Programming for Classification With Unbalanced Data

2012 / IEEE
By: Bhowan, U.; Mengjie Zhang; Johnston, M.;

Adaptive Unification Of Graphs Applied To Haplotype Networks

2011 / IEEE
By: Guiraldelli, R.H.G.; Rocha, R.L.A.;

Evaluating Dynamic Effects of Copy Number Alterations on Gene Expression Using a Single Transcription Model

2012 / IEEE
By: Yidong Chen; Serpedin, E.; Fang-Han Hsu; Dougherty, E.R.;

Using Genetic Algorithm to Optimize Mixed Placement of 1R/2R/3R Regenerators in Translucent Lightpaths for Energy-Efficient Design

2012 / IEEE
By: Weida Zhong; Chuanqi Wan; Zuqing Zhu;

Progressive Alignment Method Using Genetic Algorithm for Multiple Sequence Alignment

2012 / IEEE
By: Sarker, R.; Naznin, F.; Essam, D.;

Evolving Boolean Networks on Tunable Fitness Landscapes

2012 / IEEE
By: Bull, L.;

Approximating the Genetic Diversity of Populations in the Quasi-Equilibrium State

2012 / IEEE
By: Arabas, J.;

Memetic Algorithms for De Novo Motif Discovery

2012 / IEEE
By: Kin-Hong Lee; Kwong-Sak Leung; Tak-Ming Chan;

Feature Selection and Clustering of Gene Expression Profiles Using Biological Knowledge

2012 / IEEE
By: Ghosh, S.; Mitra, S.;

Individual variation in 3D visual fatigue caused by stereoscopic images

2012 / IEEE
By: Jang-Kun Song; Jung-Hoon Lee;

Algorithms and Genome Sequencing: Identifying Driver Pathways in Cancer

2012 / IEEE
By: Vandin, F.; Raphael, B.; Upfal, E.;

Investigation on Cardiovascular Risk Prediction Using Genetic Information

2012 / IEEE
By: Li-Na Pu; Yuan-Ting Zhang; Ze Zhao;

A Two-Population Based Evolutionary Approach for Optimizing Routing, Modulation and Spectrum Assignments (RMSA) in O-OFDM Networks

2012 / IEEE
By: Long Gong; Zuqing Zhu; Wei Lu; Xiang Zhou;

A New Intelligence-Based Approach for Computer-Aided Diagnosis of Dengue Fever

2012 / IEEE
By: Kumar, M.N.; Rao, V.S.H.;

Engineering Therapies for Hepatic Failure

2012 / IEEE
By: Pasha, A.S.;

TwinMARM: Two-Stage Multiscale Adaptive Regression Methods for Twin Neuroimaging Data

2012 / IEEE
By: Jiaping Wang; Gilmore, J.H.; Yimei Li; Hongtu Zhu; Weili Lin; Styner, M.;

An Analysis Pipeline with Statistical and Visualization-Guided Knowledge Discovery for Michigan-Style Learning Classifier Systems

2012 / IEEE
By: Moore, J.H.; Granizo-Mackenzie, A.; Urbanowicz, R.J.;

Reconstruction of Large-Scale Gene Regulatory Networks Using Bayesian Model Averaging

2012 / IEEE
By: Haseong Kim; Gelenbe, E.;

Robust and Global Delay-Dependent Stability for Genetic Regulatory Networks With Parameter Uncertainties

2012 / IEEE
By: Fang-Xiang Wu; Jianxin Wang; Li-Ping Tian;

Mining Bucket Order-Preserving SubMatrices in Gene Expression Data

2012 / IEEE
By: Jianlin Feng; Ng, W.; Qiong Fang; Yuliang Li;

Proximity Loggers: Data Handling and Classification for Quality Control

2012 / IEEE
By: O'Neill, C.J.; Watson-Haigh, N.S.; Kadarmideen, H.N.;

Relevant and Significant Supervised Gene Clusters for Microarray Cancer Classification

2012 / IEEE
By: Das, C.; Maji, P.;

Normal Molecular Repair Mechanisms in Regenerative Peripheral Nerve Interfaces Allow Recording of Early Spike Activity Despite Immature Myelination

2012 / IEEE
By: Seifert, J.L.; Desai, V.; Watson, R.C.; Musa, T.; Young-tae Kim; Keefer, E.W.; Romero, M.I.;

Representative Distance: A New Similarity Measure for Class Discovery From Gene Expression Data

2012 / IEEE
By: Le Li; You, J.; Zhiwen Yu; Guoqiang Han; Hau-San Wong;

Correlation of Genomic Features With Dynamic Modularity in the Yeast Interactome: A View From the Structural Perspective

2012 / IEEE
By: Huiru Zheng; Haiying Wang;

Extracting Gene-Gene Interactions Through Curve Fitting

2012 / IEEE
By: Das, R.; Murthy, C.A.; Mitra, S.;

Effect of Particle Size of Hydroxyapatite Nanoparticles on its Biocompatibility

2012 / IEEE
By: Yang Xue; Tingting Ding; Jiao Sun; Zhewei Huang; Hua Lu;

Stability and Bifurcation of Ring-Structured Genetic Regulatory Networks With Time Delays

2012 / IEEE
By: Fang-Xiang Wu;

A Survey on Filter Techniques for Feature Selection in Gene Expression Microarray Analysis

2012 / IEEE
By: de Schaetzen, V.; Molter, C.; Coletta, A.; Steenhoff, D.; Meganck, S.; Duque, R.; Lazar, C.; Taminau, J.; Nowe, A.; Bersini, H.;

On the Elusiveness of Clusters

2012 / IEEE
By: Scornavacca, C.; Kelk, S.; van Iersel, L.;

2012 / IEEE
By: Finley, R.L.; Amin, M.S.; Jamil, H.M.;

DICLENS: Divisive Clustering Ensemble with Automatic Cluster Number

2012 / IEEE
By: Mimaroglu, S.; Aksehirli, E.;

Transient Dynamics of Reduced-Order Models of Genetic Regulatory Networks

2012 / IEEE
By: Pal, R.; Bhattacharya, S.;

Time Series Dependent Analysis of Unparametrized Thomas Networks

2012 / IEEE
By: Klarner, H.; Bockmayr, A.; Siebert, H.;

Improving Protein-Protein Interaction Pair Ranking with an Integrated Global Association Score

2012 / IEEE
By: Tsai, R.T.-H.;

The GA and the GWAS: Using Genetic Algorithms to Search for Multilocus Associations

2012 / IEEE
By: Wilmot, B.; Mooney, M.A.; McWeeney, S.K.;

Fast Local Search for Unrooted Robinson-Foulds Supertrees

2012 / IEEE
By: Fernandez-Baca, D.; Burleigh, J.G.; Chaudhary, R.;

An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence

2012 / IEEE
By: Hon, W.K.; Lam, T.W.; Wong, T.K.F.; Ma, C.; Yiu, S.M.; Sadakane, K.;

Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods

2012 / IEEE
By: Miyano, S.; Print, C.; Yoshida, R.; Nagasaki, M.; Kawano, S.; Yamaguchi, R.; Imoto, S.; Niida, A.; Shimamura, T.;

Evaluation of Design Strategies for Time Course Experiments in Genetic Networks: Case Study of the XlnR Regulon in Aspergillus niger

2012 / IEEE
By: de Graaff, L.H.; Mach-Aigner, A.R.; Omony, J.; van Boxtel, A.J.B.; van Straten, G.;

Sequence-Based Prediction of DNA-Binding Residues in Proteins with Conservation and Correlation Information

2012 / IEEE
By: Jing Guo; Xin Ma; Xiao Sun; Jian-Ming Xie; Hong-De Liu;

Mutation Region Detection for Closely Related Individuals without a Known Pedigree

2012 / IEEE
By: Wenji Ma; Lusheng Wang; Zhi-Zhong Chen; Yong Yang;

Gene Selection Using Iterative Feature Elimination Random Forests for Survival Outcomes

2012 / IEEE
By: Tiejun Tong; Hui, K.; George, S.L.; Pang, H.;

Robust Classification Method of Tumor Subtype by Using Correlation Filters

2012 / IEEE
By: Shu-Lin Wang; De-Shuang Huang; Wei Jia; Yi-Hai Zhu;

A Biologically Inspired Validity Measure for Comparison of Clustering Methods over Metabolic Data Sets

2012 / IEEE
By: Carrari, F.; Lopez, M.G.; Kamenetzky, L.; Milone, D.H.; Stegmayer, G.;

Using GPUs for the Exact Alignment of Short-Read Genetic Sequences by Means of the Burrows-Wheeler Transform

2012 / IEEE
By: Dominguez, A.T.; Espert, I.B.; Torres, J.S.; Blazquez, J.D.; Gimenez, J.T.; Castello, I.M.; Garcia, V.H.;

Algorithms for Reticulate Networks of Multiple Phylogenetic Trees

2012 / IEEE
By: Zhi-Zhong Chen; Lusheng Wang;

Stochastic Gene Expression Modeling with Hill Function for Switch-Like Gene Responses

2012 / IEEE
By: Gelenbe, E.; Haseong Kim;

The Phosphorylation of the Heat Shock Factor as a Modulator for the Heat Shock Response

2012 / IEEE
By: Czeizler, E.; Petre, I.; Rogojin, V.;

A Characterization of the Set of Species Trees that Produce Anomalous Ranked Gene Trees

2012 / IEEE
By: Rosenberg, N.A.; Degnan, J.H.; Stadler, T.;

The LASSO and Sparse Least Squares Regression Methods for SNP Selection in Predicting Quantitative Traits

2012 / IEEE
By: Xiaojian Yang; Feng, Z.Z.; McNicholas, P.D.; Subedi, S.;

Empirical Evidence of the Applicability of Functional Clustering through Gene Expression Classification

2012 / IEEE
By: Krejnik, M.; Klema, J.;

Predicting Protein Function by Multi-Label Correlated Semi-Supervised Learning

2012 / IEEE
By: McQuay, L.J.; Jiang, J.Q.;

CSD Homomorphisms between Phylogenetic Networks

2012 / IEEE
By: Willson, S.J.;

Multiscale Denoising of Biological Data: A Comparative Analysis

2012 / IEEE
By: Meskin, N.; Nounou, H.N.; Nounou, M.N.; Dougherty, E.R.; Datta, A.;

In Silico Search of DNA Drugs Targeting Oncogenes

2012 / IEEE
By: Gizeli, E.; Papadakis, G.;

A Metric for Phylogenetic Trees Based on Matching

2012 / IEEE
By: Rajan, V.; Yu Lin; Moret, B.M.E.;

Fuzzy Intervention in Biological Phenomena

2012 / IEEE
By: Nounou, H.N.; Dougherty, E.R.; Datta, A.; Meskin, N.; Nounou, M.N.;

Output-Sensitive Algorithms for Finding the Nested Common Intervals of Two General Sequences

2012 / IEEE
By: Biing-Feng Wang;

Mutagenic Primer Design for Mismatch PCR-RFLP SNP Genotyping Using a Genetic Algorithm

2012 / IEEE
By: Li-Yeh Chuang; Cheng-Huei Yang; Yu-Huei Cheng; Cheng-Hong Yang;

GSGS: A Computational Approach to Reconstruct Signaling Pathway Structures from Gene Sets

2012 / IEEE
By: Judeh, T.; Acharya, L.; Dongxiao Zhu; Rabbat, M.; Zhansheng Duan;

The Kernel of Maximum Agreement Subtrees

2012 / IEEE
By: Sankoff, D.; Pattengale, N.D.; Chen, E.; Swenson, K.M.;

A New Efficient Data Structure for Storage and Retrieval of Multiple Biosequences

2012 / IEEE
By: Steinbiss, S.; Kurtz, S.;

Refining Regulatory Networks through Phylogenetic Transfer of Information

2012 / IEEE
By: Moret, B.M.E.; Xiuwei Zhang;

A Novel Method to Select Informative SNPs and Their Application in Genetic Association Studies

2012 / IEEE
By: Wen Zhu; Xiong Li; Bo Liao; Zhi Cao;

On the Steady-State Distribution in the Homogeneous Ribosome Flow Model

2012 / IEEE
By: Margaliot, M.; Tuller, T.;

Eigen-Genomic System Dynamic-Pattern Analysis (ESDA): Modeling mRNA Degradation and Self-Regulation

2012 / IEEE
By: Markey, M.K.; Daifeng Wang; Arapostathis, A.; Wilke, C.O.;

Weighted Markov Chain Based Aggregation of Biomolecule Orderings

2012 / IEEE
By: Sengupta, D.; Bandyopadhyay, S.; Maulik, U.;

A New Measure of Classifier Performance for Gene Expression Data

2012 / IEEE
By: Hanczar, B.; Bar-Hen, A.;

Simultaneous Identification of Duplications, Losses, and Lateral Gene Transfers

2012 / IEEE
By: Fei Deng; Zhi-Zhong Chen; Lusheng Wang;

High Performance Computational Systems Biology

2012 / IEEE
By: Mazza, T.;

Inferring Gene Regulatory Networks via Nonlinear State-Space Models and Exploiting Sparsity

2012 / IEEE
By: Nounou, M.; Serpedin, E.; Noor, A.; Nounou, H.N.;

CEDER: Accurate Detection of Differentially Expressed Genes by Combining Significance of Exons Using RNA-Seq

2012 / IEEE
By: Lin Wan; Fengzhu Sun;

The Impact of Normalization and Phylogenetic Information on Estimating the Distance for Metagenomes

2012 / IEEE
By: Daryi Wang; Cheng-Yan Kao; Weng, F.C.-H.; Ming-Tsung Hsu; Tse-Yi Wang; Chien-Hao Su; Huai-Kuang Tsai;

A New Unsupervised Feature Ranking Method for Gene Expression Data Based on Consensus Affinity

2012 / IEEE
By: Ying Shen; Hau-San Wong; Shaohong Zhang; Dongqing Xie;

Stability Analysis of the Ribosome Flow Model

2012 / IEEE
By: Tuller, T.; Margaliot, M.;

A Fast Ranking Algorithm for Predicting Gene Functions in Biomolecular Networks

2012 / IEEE
By: Mesiti, M.; Re, M.; Valentini, G.;

Distinguishing Endogenous Retroviral LTRs from SINE Elements Using Features Extracted from Evolved Side Effect Machines

2012 / IEEE
By: Ashlock, W.; Datta, S.;

Robust Approaches for Genetic Regulatory Network Modeling and Intervention: A review of recent advances

2012 / IEEE
By: Bhattacharya, S.; Pal, R.; Caglar, M.U.;

Investigating Topic Models' Capabilities in Expression Microarray Data Classification

2012 / IEEE
By: Murino, V.; Polverari, A.; Pezzotti, M.; Delledonne, M.; Bicego, M.; Fasoli, M.; Perina, A.; Lovato, P.;

Detecting Changes in DNA Copy Number: Reviewing signal processing techniques

2012 / IEEE
By: Pique-Regi, R.; Ortega, A.; Tewfik, A.; Asgharzadeh, S.;

Computational Prediction of Important Regions in Protein Sequences [Life Sciences]

2012 / IEEE
By: Pietrosemoli, N.; Pazos, F.; Segura-Cabrera, A.; Lopez, D.;

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Topic: Genetics

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